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中文题名:

 好氧颗粒污泥中高附着菌的群体感应基因筛选与功能调控    

姓名:

 王蕾    

保密级别:

 公开    

论文语种:

 中文    

学科代码:

 083002    

学科专业:

 环境工程    

学生类型:

 硕士    

学位:

 工学硕士    

学位类型:

 学术学位    

学位年度:

 2020    

校区:

 北京校区培养    

学院:

 环境学院    

研究方向:

 水质污染控制    

第一导师姓名:

 竺建荣    

第一导师单位:

 北京师范大学环境学院    

提交日期:

 2020-06-26    

答辩日期:

 2020-06-07    

外文题名:

 THE SCREENING AND FUNCTIONAL REGULATION FOR QS RELATED GENES OF THE BACTERIA WITH HIGH-ATTACHMENT IN AGAS    

中文关键词:

 基因筛选 ; QS ; AGAS ; 微生物附着性能 ; 基因重组 ; 基因代谢通路    

外文关键词:

 Gene Screening ; QS ; AGAS ; Microbial Attachment Ability ; Gene Recombination ; Gene Metabolic Pathway    

中文摘要:

好氧颗粒污泥Aerobic granular activated sludgeAGAS工艺作为一种高效的废水处理技术,相较于絮体活性污泥Floc activated sludgeFAS)技术,具有无可比拟的优势。AGAS在本质上是一种颗粒状的生物聚集体,因此,从微生物角度来研究AGAS微生物的生长及其相互作用与联系是十分有必要的。微生物自身的群体感应(Quorum sensing,QS)系统会通过产生的自体诱导物(即信号分子)对微生物的生长和代谢等生理行为进行调控。本研究即是微生物的QS系统作为切入点针对N-酰化高丝氨酸内酯类分子(N-Acyl-homoserine lactonesAHLs介导的种内QS系统与呋喃酰硼酸二酯类分子(Furanosyl borate diesterAutoinducter-2AI-2)介导的种间QS系统,通过构建AGAS中微生物QS相关基因缺失重组突变菌株阐明QS系统对于微生物的附着生长与胞外多聚物Extracellular polymeric substancesEPS的调控与分子作用机制明晰QS系统对于微生物生长与相互作用的影响进而探究其在AGAS形成过程中的贡献为阐明AGAS形成的内在机理提供新的理论依据

本研究得到的主要研究成果如下

(1) 实际污泥样品(FASAGAS以及AGAS分离菌株(AGAS-1,2,3,4,5,6)都能产生AHLs与AI-2其中,AGAS中的AHLsAI-2EPSFAS,且微生物产生的AHLs、AI-2EPS中的胞外多糖物质(Extracellular polysaccharidesPS)以及胞外蛋白物质(Extracellular proteinsPN)与其自身附着性能呈现一定的正相关性

(2) 根据三维荧光光谱(The three dimensional excitation-emission-matrix fluorescence spectra3D-EEM分析结果,AGASFAS产生的EPS组分较为相似,但含量有一定的差异;而在AGAS分离菌株中,高附着菌与低附着菌的EPS在组分与含量上均存在差异;并且在实际污泥样品与AGAS分离菌株的EPS中存在一种可能对微生物的附着性能具有促进作用的物质。

(3) 不同实际污泥样品与AGAS分离菌株中的QS相关基因具有差异性。根据PCRPolymerase Chain Reaction聚合酶链式反应)扩增结果,以AGAS中的高附着分离菌株AGAS-1作为研究主体,利用自杀质粒同源重组基因编辑技术成功构建基因lasRAHLs介导的QS系统相关)与基因tqsAAI-2介导的QS系统相关)缺失重组突变菌株通过荧光定量PCR研究发现,以AGAS-1的野生型菌株(AGAS-1-Wild TypeAGAS-1-WT)作为参比,基因lasR缺失重组突变菌株(AGAS-1-ΔlasR中基因lasR表达、基因tqsA缺失重组突变菌株(AGAS-1-ΔtqsA中基因tqsA表达明显下降而利用转录组学分析——RNA测序Ribonucleic acid sequencing,RNA-seq,核糖核酸测序)分析发现,在转录组水平上,AGAS-1-ΔlasR基因lasR的相对表达量显著下降11.92倍;AGAS-1-ΔtqsA基因tqsA的相对表达量下降2.33,表明这些QS基因的表达微生物的信号分子、EPS产生以及附着生长等性能密切相关

(4) 相较于野生菌株AGAS-1-WT,基因lasR缺失重组突变菌株AGAS-1-ΔlasRAHLsEPS与附着性能相对含量均呈下降趋势。而根据RNA-seq分析结果,基因lasR及其相关基因调控的AHLs介导的QS系统在AGAS-1中会通过影响其产生的D-丙氨酸、脂肪酸与PslPolysaccharide synthesis locus,一种通过多糖合成位点合成的PS)等物质,从而影响了菌体的附着性能

(5) 相较于野生菌株AGAS-1-WT,基因tqsA缺失重组突变菌株AGAS-1-ΔtqsAAI-2EPS相对含量下降,而附着性能上升。研究发现,基因tqsA及其相关基因调控的AI-2介导的QS系统在AGAS-1中会对AI-2的受体分子LuxQ/ArcB以及信号传导分子BarA产生影响,并共同调控菌体PS、粘附素脂肪酸等物质的产生以及与运动相关、菌毛相关等基因的表达,进而影响菌体的附着性能。

综上,本研究探索了QS相关基因lasR与基因tqsAAGAS-1中的分子代谢通路与调控作用,揭示了由AHLs/AI-2介导的QS系统对微生物附着性能的调控机制。即基于两种信号分子AHLs/AI-2介导的QS系统会通过调控AGAS-1中的多种物质而共同影响着其附着性能,从而可能在AGAS的形成过程中发挥作用。这些研究结果对更好建立和开发AGAS的关键培养技术实现其快速稳定培养,进而推广AGAS技术在实际废水处理中的大规模工程应用具有重要的理论意义和实际价值。

外文摘要:

Aerobic granular activated sludge (AGAS), as an efficient wastewater treatment technology, had incomparable advantages compared to floc activated sludge (FAS). AGAS was a granular biological aggregation formed by self-immobilization microorganisms, thus, it was necessary to study the growth, interactions and associations of microorganisms in AGAS. Quorum sensing (QS) system could regulate the physiological behavior (e.g., growth and metabolism etc.) of microorganisms through the autoinducters (i.e., signal molecules) which were produced by themselves. Therefore, in this study, the QS was selected as the observation point and for the N-Acyl-homoserine lactones (AHLs) and the Furanosyl borate diester (Autoinducter-2, AI-2), the molecular and regulatory mechanism of the QS system on the adhesive growth and extracellular polymeric substances (EPS) of the microorganisms in AGAS would be investigated by constructing mutated strains with non-QS-associated genes. On the basis of it, the effect of QS on the growth and function of microorganisms in AGAS would be elucidated, which would clarify the contribution of QS to the formation of AGAS, so as to provide a new theoretical basis for understanding the mechanism of AGAS formation. The main research results obtained in this study were as follows:

(1) FAS, AGAS and the strains-AGAS-1,2,3,4,5,6 isolated from AGAS could all produce AHLs and AI-2. The AHLs, the AI-2 and the EPS in AGAS were higher than FAS, and it had a positive correlation between the attachment ability and the AHLs, the AI-2, the extracellular polysaccharides (PS) and the extracellular proteins (PN) in EPS produced by microorganisms.

(2) According to the 3 dimensional excitation-emission-matrix fluorescence spectra(3D-EEM), it was found that the components of the EPS in AGAS were similar with FAS, while the concentrations were different between them. Both the concentration and component of the EPS were different between high attachment strains and low attachment strains which were isolated from AGAS. Furthermore, a component of the EPS was found in the different sludges and all strains isolated from AGAS, which might promote the adhesion of microorganisms.

(3) There were the variations for the QS genes in different sludge samples and the strains isolated from AGAS. According to the polymerase chain reaction(PCR), the gene lasR (AHLs-mediated QS system) and the gene tqsA (AI-2-mediated QS system) mutants (knockout) of AGAS-1 were constructed by suicide plasmid. The expression of the gene lasR in AGAS-1-ΔlasR (AGAS-1 without gene lasR) and the gene tqsA in AGAS-1-ΔtqsA (AGAS-1 without gene tqsA) which was analyzed by the fluorescent quantitative PCR, were significantly different with AGAS-1-Wild Type (AGAS-1-WT). And it was found that the relative expression of the gene lasR, analyzed by Ribonucleic acid sequencing (RNA-seq) in AGAS-1, was decreased by 11.92 times after knocked out, and the gene tqsA was fallen down by 2.33 times. This showed that the expression of QS genes was significantly related to the signal molecules, the EPS and the attachment ability of microorganisms.

(4) The attachment ability, the AHLs and the EPS of AGAS-1-ΔlasR was shown a down trend compared with AGAS-1-WT. According to the results of RNA-seq analysis, the QS system mediated by AHLs with gene lasR and its related genes would affect the attachment ability of AGAS-1 by affecting the D-alanine, fatty acids and Psl (Polysaccharide synthesis locus, a kind of PS) in it.

(5) The AI-2 and the EPS of AGAS-1-ΔtqsA showed a down trend as well, while the attachment ability was increased when compared with AGAS-1-WT. It was found that the QS system mediated by AI-2 with gene tqsA and its related genes would affect the receptor molecule LuxQ/ArcB of AI-2 and the signal transduction molecule BarA, and then affect PS, adhesin, fatty acids, cell motility and fimbria, thereby affect the attachment ability of AGAS-1.

In summary, this study explored the molecular metabolic pathways of QS-related genes (lasR and tqsA) which revealed the regulation mechanism of QS system mediated by AHLs and AI-2 on microbial attachment ability. That was the QS system which would regulate the production of multifarious substances in AGAS-1, jointly affect the adhesion, consequently the role in the formation of AGAS. It had an important theoretical significance and practical application value for developing the key cultivation technology for AGAS, achieving a rapid and stable formation, and then finally promoting the full-scale application.

参考文献总数:

 146    

作者简介:

 北京师范大学环境学院2017级硕士研究生    

馆藏号:

 硕083002/20013    

开放日期:

 2021-06-26    

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